Hi Alex,
There is no information in the MapData msg about the radius of the nodes. The radius is defined on visualization side by some defautl fixed size. In rtabmapviz, the size of the blue circles in Graph View can be changed on right-click menu, see "Set node radius..." in the screenshot above.
On rviz side, there is no nodes, only links (see MapGraph plugin
here). I suggest to make a ROS node, subscribe to MapGraph or MapData topics and republish a Marker or MarkerArray with the data you want to show in rviz.
cheers,
Mathieu